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  5. Mp1g18780.1

Mp1g18780.1


Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g18780.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
140819 No alias glycine-rich RNA-binding protein 4 0.02 Orthogroups_2024-Update
A4A49_10213 No alias glycine-rich rna-binding protein rz1a 0.02 Orthogroups_2024-Update
At3g08000 No alias At3g08000 [Source:UniProtKB/TrEMBL;Acc:Q9SFB4] 0.02 Orthogroups_2024-Update
Brara.K01454.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G009448 No alias glycine-rich RNA-binding protein 3 0.02 Orthogroups_2024-Update
GRMZM6G285883 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update
Glyma.08G075700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update
Glyma.15G040500 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G093400.1 No alias RNA editing factor *(ORRM3) 0.02 Orthogroups_2024-Update
Kfl00609_0010 kfl00609_0010_v1.... (p49310|grp1_sinal : 126.0) Glycine-rich RNA-binding... 0.01 Orthogroups_2024-Update
LOC_Os12g31800 No alias glycine-rich RNA-binding protein 7, putative, expressed 0.02 Orthogroups_2024-Update
MA_526835g0010 No alias (at5g61030 : 112.0) encodes a glycine-rich RNA binding... 0.02 Orthogroups_2024-Update
MA_8928477g0010 No alias (at5g61030 : 124.0) encodes a glycine-rich RNA binding... 0.02 Orthogroups_2024-Update
Potri.004G155300 No alias cold, circadian rhythm, and RNA binding 1 0.02 Orthogroups_2024-Update
Potri.008G033000 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update
Potri.009G116400 No alias cold, circadian rhythm, and RNA binding 1 0.03 Orthogroups_2024-Update
Potri.014G157300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Pp1s118_101V6 No alias glycine-rich rna-binding 0.04 Orthogroups_2024-Update
Pp1s123_58V6 No alias glycine-rich rna-binding protein 2 0.03 Orthogroups_2024-Update
Pp1s42_251V6 No alias glycine-rich rna-binding protein 2 0.03 Orthogroups_2024-Update
Seita.2G062600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G450300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc10g051390 No alias RNA-binding glycine-rich protein (AHRD V3.3 *** D6PZY6_TOBAC) 0.02 Orthogroups_2024-Update
Sopen01g051850 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen02g033510 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen10g023060 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen10g023080 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update
Sopen11g003980 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 15 83
No external refs found!