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  5. Mp1g20320.1

Mp1g20320.1


Description : component THOC2/Tho2 of mRNP trafficking THO subcomplex


Gene families : OG_42_0005064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g20320.1
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
173562 No alias THO2 0.02 Orthogroups_2024-Update
Bradi1g24950 No alias THO2 0.02 Orthogroups_2024-Update
Bradi2g58697 No alias THO2 0.04 Orthogroups_2024-Update
Cre12.g507700 No alias THO2 0.03 Orthogroups_2024-Update
GRMZM2G461356 No alias THO2 0.03 Orthogroups_2024-Update
Glyma.05G241400 No alias THO2 0.05 Orthogroups_2024-Update
Glyma.08G048400 No alias THO2 0.02 Orthogroups_2024-Update
Kfl00157_0140 kfl00157_0140_v1.1 (at1g24706 : 704.0) Encodes a component of the putative... 0.02 Orthogroups_2024-Update
Potri.013G085000 No alias THO2 0.03 Orthogroups_2024-Update
Potri.019G054600 No alias THO2 0.03 Orthogroups_2024-Update
Seita.5G427500.1 No alias component *(THOC2/Tho2) of mRNP trafficking THO subcomplex 0.02 Orthogroups_2024-Update
Sobic.003G401600.1 No alias component *(THOC2/Tho2) of mRNP trafficking THO subcomplex 0.04 Orthogroups_2024-Update
Sopen05g014610 No alias hypothetical protein 0.02 Orthogroups_2024-Update
evm.model.tig00001428.15 No alias (at1g24706 : 246.0) Encodes a component of the putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021418 THO_THOC2_C 927 1221
IPR032302 THOC2_N 441 596
IPR032302 THOC2_N 36 412
IPR021726 THO_THOC2_N 598 673
No external refs found!