1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g113580

Solyc03g113580


Description : Germin-like protein (AHRD V3.3 *** Q8H2A6_ANACO)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g113580
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
109995 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
227274 No alias Function unknown 0.02 Orthogroups_2024-Update
229747 No alias germin-like protein 5 0.02 Orthogroups_2024-Update
270502 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
428138 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g04907 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Orthogroups_2024-Update
Bradi3g15210 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g37680 No alias germin-like protein 1 0.04 Orthogroups_2024-Update
Brara.G02258.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04761.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.20G220800 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G009470.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G034100.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G005380.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G109190.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g32980 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g35760 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_926447g0010 No alias (at5g20630 : 238.0) Encodes a germin-like protein. Its... 0.02 Orthogroups_2024-Update
Potri.005G001300 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
Potri.009G140400 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G162200 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G051600 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G310700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G050100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G066500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g088300 No alias Germin-like protein 1 (AHRD V3.3 *** B9NCV4_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 206
No external refs found!