At5g04800


Description : 40S ribosomal protein S17-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ17]


Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g04800
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
270936 No alias Ribosomal S17 family protein 0.03 Orthogroups_2024-Update
Bradi3g29060 No alias Ribosomal S17 family protein 0.04 Orthogroups_2024-Update
Brara.B00154.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Brara.C00178.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.E03000.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.J02711.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Cre12.g498250 No alias Ribosomal S17 family protein 0.09 Orthogroups_2024-Update
Glyma.02G200300 No alias Ribosomal S17 family protein 0.04 Orthogroups_2024-Update
Glyma.07G219500 No alias Ribosomal S17 family protein 0.08 Orthogroups_2024-Update
Glyma.10G076400 No alias Ribosomal S17 family protein 0.05 Orthogroups_2024-Update
Glyma.20G017700 No alias Ribosomal S17 family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G042220.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Kfl00038_0080 kfl00038_0080_v1.1 (at5g04800 : 192.0) Ribosomal S17 family protein;... 0.02 Orthogroups_2024-Update
LOC_Os10g27190 No alias 40S ribosomal protein S17, putative, expressed 0.05 Orthogroups_2024-Update
MA_184894g0010 No alias (at5g04800 : 212.0) Ribosomal S17 family protein;... 0.04 Orthogroups_2024-Update
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.06 Orthogroups_2024-Update
PSME_00034734-RA No alias (at5g04800 : 198.0) Ribosomal S17 family protein;... 0.07 Orthogroups_2024-Update
Potri.008G017300 No alias Ribosomal S17 family protein 0.03 Orthogroups_2024-Update
Pp1s2_298V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s39_287V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s76_75V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Seita.9G218400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Seita.9G497100.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.010G076400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Solyc05g055230 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.11 Orthogroups_2024-Update
Solyc11g006690 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.13 Orthogroups_2024-Update
Sopen05g033670 No alias Ribosomal S17 0.1 Orthogroups_2024-Update
Sopen10g032640 No alias Ribosomal S17 0.1 Orthogroups_2024-Update
Sopen11g002620 No alias Ribosomal S17 0.12 Orthogroups_2024-Update
evm.model.contig_2507.2 No alias (at2g05220 : 160.0) Ribosomal S17 family protein;... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006784 heme a biosynthetic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046160 heme a metabolic process IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 120
No external refs found!