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  5. Mp1g23960.1

Mp1g23960.1


Description : NUP133 scaffold nucleoporin of nuclear pore complex


Gene families : OG_42_0007153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g23960.1
Cluster HCAA Clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
At2g05120 No alias Nucleoporin, Nup133/Nup155-like [Source:TAIR;Acc:AT2G05120] 0.02 Orthogroups_2024-Update
Bradi1g69360 No alias Nucleoporin, Nup133/Nup155-like 0.02 Orthogroups_2024-Update
GRMZM2G058374 No alias Nucleoporin, Nup133/Nup155-like 0.03 Orthogroups_2024-Update
Seita.9G484200.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP133) 0.02 Orthogroups_2024-Update
Sobic.001G450000.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP133) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR014908 Nucleoporin_Nup133/Nup155_N 82 525
IPR007187 Nucleoporin_Nup133/Nup155_C 971 1066
No external refs found!