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  5. Mp1g24800.1

Mp1g24800.1


Description : alpha amylase


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g24800.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Brara.A02054.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
GRMZM2G103055 No alias alpha-amylase-like 0.02 Orthogroups_2024-Update
HORVU0Hr1G032700.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
HORVU3Hr1G067620.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
HORVU6Hr1G080790.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Kfl00228_0110 kfl00228_0110_v1.1 (p04063|amy2_horvu : 536.0) Alpha-amylase type B isozyme... 0.03 Orthogroups_2024-Update
LOC_Os01g51754 No alias alpha-amylase precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g33040 No alias alpha-amylase precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00011482-RA No alias (p27933|amy3d_orysa : 429.0) Alpha-amylase isozyme 3D... 0.03 Orthogroups_2024-Update
PSME_00049240-RA No alias (p27934|amy3e_orysa : 535.0) Alpha-amylase isozyme 3E... 0.02 Orthogroups_2024-Update
Pp1s100_191V6 No alias at1g69830 t17f3_14 0.02 Orthogroups_2024-Update
Pp1s526_11V6 No alias glycoside hydrolase family 13 protein 0.02 Orthogroups_2024-Update
Solyc04g078930 No alias Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC) 0.02 Orthogroups_2024-Update
evm.model.contig_2050.12 No alias (at1g69830 : 347.0) Encodes a plastid-localized... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
MF GO:0004556 alpha-amylase activity IEA 16Dec
MF GO:0005509 calcium ion binding IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 128 423
IPR012850 A-amylase_bs_C 444 504
No external refs found!