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  5. Mp1g25160.1

Mp1g25160.1


Description : Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 769.0)


Gene families : OG_42_0006730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006730_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g25160.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g58780 No alias pentatricopeptide repeat protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR033443 PPR_long 623 765
IPR002885 Pentatricopeptide_repeat 375 402
IPR002885 Pentatricopeptide_repeat 236 261
IPR000504 RRM_dom 91 164
IPR002885 Pentatricopeptide_repeat 266 315
IPR002885 Pentatricopeptide_repeat 546 595
IPR002885 Pentatricopeptide_repeat 337 369
IPR002885 Pentatricopeptide_repeat 406 454
IPR002885 Pentatricopeptide_repeat 476 525
No external refs found!