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Description : component LSm4 of U6-associated LSm accessory ribonucleoprotein complex
Gene families : OG_42_0005270 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha: Mp1g27390.1 | |
| Cluster | HCAA Clusters: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Seita.5G056700.1 | No alias | Unknown function | 0.08 | Orthogroups_2024-Update | |
| evm.model.tig00000480.60 | No alias | (q43582|lsm4_tobac : 154.0) Probable U6 snRNA-associated... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Predicted GO |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Predicted GO |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predicted GO |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Predicted GO |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Predicted GO |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Predicted GO |
| BP | GO:0034311 | diol metabolic process | IEP | Predicted GO |
| BP | GO:0034312 | diol biosynthetic process | IEP | Predicted GO |
| BP | GO:0042546 | cell wall biogenesis | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Predicted GO |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 6 | 70 |
| No external refs found! |