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Description : Small RNA degrading nuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFG1]
Gene families : OG_42_0005455 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005455_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At5g05540 | |
| Cluster | HCCA clusters: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os04g55700 | No alias | exonuclease, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Sopen10g033610 | No alias | Exonuclease | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Predicted GO |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Predicted GO |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| CC | GO:0019867 | outer membrane | IEP | Predicted GO |
| BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
| CC | GO:0030131 | clathrin adaptor complex | IEP | Predicted GO |
| MF | GO:0031491 | nucleosome binding | IEP | Predicted GO |
| BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Predicted GO |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0070403 | NAD+ binding | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013520 | Exonuclease_RNaseT/DNA_pol3 | 143 | 297 |
| No external refs found! |