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  5. Mp2g02760.1

Mp2g02760.1


Description : mRNA unwinding factor (eIF4A)


Gene families : OG_42_0000623 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g02760.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
143895 No alias eukaryotic translation initiation factor 4A1 0.1 Orthogroups_2024-Update
At1g54270 No alias eIF4A-2 [Source:UniProtKB/TrEMBL;Acc:A0A178W4U1] 0.06 Orthogroups_2024-Update
At1g72730 No alias Eukaryotic initiation factor 4A-3... 0.06 Orthogroups_2024-Update
At3g13920 No alias Eukaryotic translation initiation factor 4A1... 0.02 Orthogroups_2024-Update
At3g19760 No alias Eukaryotic initiation factor 4A-III homolog... 0.05 Orthogroups_2024-Update
Brara.A02854.1 No alias helicase component *(eIF4A3) of RNA quality control Exon... 0.03 Orthogroups_2024-Update
Brara.A03225.1 No alias mRNA unwinding factor *(eIF4A)) 0.05 Orthogroups_2024-Update
Brara.E02231.1 No alias helicase component *(eIF4A3) of RNA quality control Exon... 0.09 Orthogroups_2024-Update
Glyma.06G053200 No alias eukaryotic translation initiation factor 4A1 0.02 Orthogroups_2024-Update
Glyma.09G052500 No alias eukaryotic initiation factor 4A-III 0.03 Orthogroups_2024-Update
Glyma.13G106200 No alias eukaryotic translation initiation factor 4A1 0.03 Orthogroups_2024-Update
Glyma.15G026100 No alias eif4a-2 0.02 Orthogroups_2024-Update
Glyma.15G171800 No alias eukaryotic translation initiation factor 4A1 0.02 Orthogroups_2024-Update
Glyma.17G053200 No alias eif4a-2 0.05 Orthogroups_2024-Update
PSME_00000892-RA No alias (p35683|if4a_orysa : 720.0) Eukaryotic initiation factor... 0.02 Orthogroups_2024-Update
PSME_00024625-RA No alias (p41380|if4a3_nicpl : 382.0) Eukaryotic initiation... 0.04 Orthogroups_2024-Update
Pp1s31_150V6 No alias Eukaryotic initiation factor 4A-9 (ATP-dependent RNA... 0.05 Orthogroups_2024-Update
Pp1s77_16V6 No alias No description available 0.07 Orthogroups_2024-Update
Seita.4G242200.1 No alias mRNA unwinding factor *(eIF4A)) 0.16 Orthogroups_2024-Update
Solyc08g062800 No alias RNA helicase DEAD26 0.07 Orthogroups_2024-Update
Solyc11g033280 No alias Dead box ATP-dependent RNA helicase, putative (AHRD V3.3... 0.05 Orthogroups_2024-Update
Solyc12g095990 No alias RNA helicase DEAD40 0.02 Orthogroups_2024-Update
Sopen08g018310 No alias DEAD/DEAH box helicase 0.1 Orthogroups_2024-Update
Sopen12g031880 No alias DEAD/DEAH box helicase 0.04 Orthogroups_2024-Update
Sopen12g031890 No alias DEAD/DEAH box helicase 0.04 Orthogroups_2024-Update
evm.model.tig00000970.17 No alias (p35683|if4a_orysa : 555.0) Eukaryotic initiation factor... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902562 H4 histone acetyltransferase complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
IPR001650 Helicase_C 266 374
No external refs found!