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  5. Mp2g04260.1

Mp2g04260.1


Description : ribonuclease (TSN)


Gene families : OG_42_0003234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g04260.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At5g61780 No alias Ribonuclease TUDOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT0] 0.02 Orthogroups_2024-Update
Brara.B00241.1 No alias mRNA endoribonuclease *(TSN) 0.02 Orthogroups_2024-Update
Brara.F02051.1 No alias mRNA endoribonuclease *(TSN) 0.02 Orthogroups_2024-Update
Glyma.05G199100 No alias TUDOR-SN protein 1 0.03 Orthogroups_2024-Update
Glyma.08G006400 No alias TUDOR-SN protein 1 0.02 Orthogroups_2024-Update
evm.model.tig00021357.71 No alias (at5g61780 : 249.0) Involved in the regulation of ... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 621 719
IPR016071 Staphylococal_nuclease_OB-fold 274 367
IPR016071 Staphylococal_nuclease_OB-fold 868 971
IPR016071 Staphylococal_nuclease_OB-fold 35 144
IPR002999 Tudor 740 861
No external refs found!