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  5. Mp2g05560.1

Mp2g05560.1


Description : deubiquitinase (UBP15-21)


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g05560.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At3g14400 No alias Ubiquitin carboxyl-terminal hydrolase 25... 0.01 Orthogroups_2024-Update
At4g17895 No alias Ubiquitin carboxyl-terminal hydrolase 20... 0.03 Orthogroups_2024-Update
At5g65450 No alias ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450] 0.02 Orthogroups_2024-Update
Brara.F01198.1 No alias deubiquitinase *(UBP15-21) 0.02 Orthogroups_2024-Update
Cre06.g248950 No alias ubiquitin-specific protease 18 0.01 Orthogroups_2024-Update
Cre14.g629300 No alias ubiquitin-specific protease 23 0.01 Orthogroups_2024-Update
GRMZM2G388987 No alias ubiquitin-specific protease 19 0.02 Orthogroups_2024-Update
Glyma.14G105700 No alias ubiquitin-specific protease 19 0.05 Orthogroups_2024-Update
HORVU7Hr1G111430.5 No alias deubiquitinase *(UBP15-21) 0.01 Orthogroups_2024-Update
LOC_Os02g55180 No alias ubiquitin carboxyl-terminal hydrolase domain containing... 0.01 Orthogroups_2024-Update
LOC_Os06g08530 No alias ubiquitin carboxyl-terminal hydrolase domain containing... 0.01 Orthogroups_2024-Update
PSME_00027792-RA No alias (at2g24640 : 536.0) ubiquitin-specific protease 19... 0.01 Orthogroups_2024-Update
Potri.001G394600 No alias ubiquitin-specific protease 25 0.01 Orthogroups_2024-Update
Sopen07g030100 No alias Ubiquitin carboxyl-terminal hydrolase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA 16Dec
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002893 Znf_MYND 72 110
IPR004027 SEC_C_motif 1325 1343
IPR001394 Peptidase_C19_UCH 201 504
No external refs found!