1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp2g05860.1

Mp2g05860.1


Description : chromatin remodeling factor (SHPRH)


Gene families : OG_42_0003696 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g05860.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Bradi1g17650 No alias zinc ion binding;DNA binding;helicases;ATP... 0.02 Orthogroups_2024-Update
Cre13.g603400 No alias zinc ion binding;DNA binding;helicases;ATP... 0.01 Orthogroups_2024-Update
GRMZM2G381386 No alias zinc ion binding;DNA binding;helicases;ATP... 0.02 Orthogroups_2024-Update
Solyc03g095690 No alias SNF2 domain protein/helicase domain protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen03g025610 No alias SNF2 family N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 1080 1199
IPR000330 SNF2_N 4 464
No external refs found!