Description : pre-60S subunit nuclear export factor (MRT4)
Gene families : OG_42_0004618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004618_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Marchantia polymorpha: Mp2g07300.1 | |
Cluster | HCAA Clusters: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.G00884.1 | No alias | pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4) | 0.02 | Orthogroups_2024-Update | |
Brara.I03062.1 | No alias | pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4) | 0.03 | Orthogroups_2024-Update | |
GRMZM2G109133 | No alias | Ribosomal protein L10 family protein | 0.02 | Orthogroups_2024-Update | |
Kfl00047_0030 | kfl00047_0030_v1.1 | (at1g25260 : 244.0) Ribosomal protein L10 family... | 0.04 | Orthogroups_2024-Update | |
LOC_Os12g01430 | No alias | ribosomal protein L10, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.001G460100 | No alias | Ribosomal protein L10 family protein | 0.02 | Orthogroups_2024-Update | |
Potri.011G156300 | No alias | Ribosomal protein L10 family protein | 0.01 | Orthogroups_2024-Update | |
Seita.8G020000.1 | No alias | pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4) | 0.02 | Orthogroups_2024-Update | |
Sobic.008G004000.1 | No alias | pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0042254 | ribosome biogenesis | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:0106073 | dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001790 | Ribosomal_L10P | 27 | 129 |
No external refs found! |