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  5. At5g06400

At5g06400


Description : Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNG8]


Gene families : OG_42_0009808 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009808_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g06400
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Solyc01g006850 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 852 896
IPR002885 Pentatricopeptide_repeat 466 515
IPR002885 Pentatricopeptide_repeat 922 971
IPR002885 Pentatricopeptide_repeat 222 270
IPR002885 Pentatricopeptide_repeat 715 759
IPR002885 Pentatricopeptide_repeat 369 394
IPR002885 Pentatricopeptide_repeat 762 781
IPR002885 Pentatricopeptide_repeat 332 358
IPR002885 Pentatricopeptide_repeat 435 464
IPR002885 Pentatricopeptide_repeat 820 840
IPR002885 Pentatricopeptide_repeat 401 428
IPR002885 Pentatricopeptide_repeat 191 220
No external refs found!