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  5. Mp2g11550.1

Mp2g11550.1


Description : DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana (sp|q84lk0|msh1_arath : 90.9)


Gene families : OG_42_0003122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g11550.1
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bradi3g30757 No alias DNA mismatch repair protein MutS, type 2 0.01 Orthogroups_2024-Update
LOC_Os10g36530 No alias mutS domain V family protein, expressed 0.01 Orthogroups_2024-Update
Sopen02g023250 No alias MutS domain V 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006298 mismatch repair IEA 16Dec
MF GO:0030983 mismatched DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 512 693
No external refs found!