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At5g06860


Description : PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g06860
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Brara.C00272.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.04 Orthogroups_2024-Update
Brara.E02866.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Brara.J02539.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Brara.J02540.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.05 Orthogroups_2024-Update
Kfl00196_0130 kfl00196_0130_v1.... (at5g46330 : 203.0) Encodes a leucine-rich repeat... 0.02 Orthogroups_2024-Update
Potri.006G058600 No alias polygalacturonase inhibiting protein 1 0.03 Orthogroups_2024-Update
Sopen07g033300 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 144 165
IPR013210 LRR_N_plant-typ 27 63
No external refs found!