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  5. Mp2g15260.1

Mp2g15260.1


Description : SSU processome assembly factor (UTP7)


Gene families : OG_42_0004970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g15260.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
At3g10530 No alias F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3] 0.03 Orthogroups_2024-Update
Bradi1g04226 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g502800 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Kfl00007_0390 kfl00007_0390_v1.1 (at3g10530 : 455.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Seita.5G049800.1 No alias SSU processome assembly factor *(UTP7) 0.02 Orthogroups_2024-Update
evm.model.contig_611.6 No alias (at3g10530 : 299.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 285 318
IPR012952 BING4_C_dom 367 446
No external refs found!