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  5. Mp2g15880.1

Mp2g15880.1


Description : Protein SPIRRIG OS=Arabidopsis thaliana (sp|f4hzb2|bcha1_arath : 3111.0)


Gene families : OG_42_0005216 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g15880.1
Cluster HCAA Clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
432626 No alias Beige/BEACH domain ;WD domain, G-beta repeat protein 0.03 Orthogroups_2024-Update
Glyma.02G144200 No alias Beige/BEACH domain ;WD domain, G-beta repeat protein 0.03 Orthogroups_2024-Update
Glyma.10G030000 No alias Beige/BEACH domain ;WD domain, G-beta repeat protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 3417 3452
IPR023362 PH-BEACH_dom 2909 2970
IPR000409 BEACH_dom 3009 3287
No external refs found!