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  5. Mp2g18610.1

Mp2g18610.1


Description : alpha-class expansin


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g18610.1
Cluster HCAA Clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
75237 No alias expansin A7 0.04 Orthogroups_2024-Update
A4A49_04302 No alias expansin-a10 0.02 Orthogroups_2024-Update
At3g15370 No alias Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2] 0.03 Orthogroups_2024-Update
Brara.B01861.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.G01411.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.G02887.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.I01201.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Cre03.g153850 No alias expansin A2 0.02 Orthogroups_2024-Update
Glyma.06G143300 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.07G229000 No alias expansin A15 0.02 Orthogroups_2024-Update
Glyma.19G222900 No alias expansin A17 0.02 Orthogroups_2024-Update
Glyma.20G033900 No alias expansin A15 0.03 Orthogroups_2024-Update
LOC_Os01g14650 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g16780 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g51040 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10425823g0010 No alias (q852a1|expa7_orysa : 372.0) Expansin-A7 precursor... 0.02 Orthogroups_2024-Update
MA_316222g0010 No alias (at2g40610 : 383.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Mp1g22730.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Mp1g24390.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Mp5g20420.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00006590-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00009798-RA No alias (at1g69530 : 350.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00025836-RA No alias (at2g40610 : 399.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00051669-RA No alias (at2g40610 : 425.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s191_40V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s223_38V6 No alias alpha expansin xpa5 0.04 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.02 Orthogroups_2024-Update
Seita.6G086300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.007G166500.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc03g031840 No alias expansin precursor 3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 74 161
IPR007117 Expansin_CBD 172 248
No external refs found!