Mp2g22250.1

Description : transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)

Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha: Mp2g22250.1
Cluster	HCAA Clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
A4A49_20433	No alias	b3 domain-containing transcription factor nga3	0.04	Orthogroups_2024-Update
At1g13260	No alias	AP2/ERF and B3 domain-containing transcription factor...	0.03	Orthogroups_2024-Update
Brara.B03202.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.02	Orthogroups_2024-Update
Brara.C03374.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00098.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00866.1	No alias	RAV/NGATHA-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G328742	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
Glyma.02G099500	No alias	AP2/B3 transcription factor family protein	0.02	Orthogroups_2024-Update
LOC_Os01g04800	No alias	B3 DNA binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10433425g0010	No alias	(at1g25560 : 91.3) Encodes a member of the RAV...	0.03	Orthogroups_2024-Update
PSME_00021294-RA	No alias	(at1g13260 : 294.0) Encodes an AP2/B3 domain...	0.02	Orthogroups_2024-Update
PSME_00057154-RA	No alias	(at1g13260 : 282.0) Encodes an AP2/B3 domain...	0.03	Orthogroups_2024-Update
Sobic.009G221400.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.02	Orthogroups_2024-Update
Sopen08g004540	No alias	B3 DNA binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Predicted GO
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Predicted GO
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006007	glucose catabolic process	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0019320	hexose catabolic process	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
BP	GO:0046365	monosaccharide catabolic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	501	601
IPR001471	AP2/ERF_dom	367	414

External Links

No external refs found!

Mp2g22250.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation