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  5. Mp2g25720.1

Mp2g25720.1


Description : histone chaperone (SPT6). component SPT6 of SPT6-IWS1 transcription elongation complex


Gene families : OG_42_0003957 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g25720.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Bradi2g21217 No alias global transcription factor group B1 0.02 Orthogroups_2024-Update
Glyma.03G121000 No alias global transcription factor group B1 0.02 Orthogroups_2024-Update
Glyma.19G125600 No alias global transcription factor group B1 0.05 Orthogroups_2024-Update
Kfl00507_0030 kfl00507_0030_v1.1 (at1g65440 : 900.0) Related to yeast Spt6 protein, which... 0.02 Orthogroups_2024-Update
MA_13648g0020 No alias (at1g65440 : 1064.0) Related to yeast Spt6 protein,... 0.03 Orthogroups_2024-Update
Seita.3G193600.1 No alias component *(SPT6) of SPT6-IWS1 transcription elongation complex 0.03 Orthogroups_2024-Update
Solyc10g081020 No alias Transcription elongation factor SPT6 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR028088 Spt6_HTH_DNA-bd_dom 329 452
IPR028083 Spt6_acidic_N_dom 30 127
IPR035420 Spt6_SH2 1240 1455
IPR028231 Spt6_YqgF 756 911
IPR032706 Spt6_HHH 915 1017
No external refs found!