Mp2g26050.1

Description : component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex

Gene families : OG_42_0004523 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004523_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha: Mp2g26050.1
Cluster	HCAA Clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
At2g40360	No alias	Ribosome biogenesis protein BOP1 homolog...	0.04	Orthogroups_2024-Update
Bradi3g39580	No alias	Transducin/WD40 repeat-like superfamily protein	0.05	Orthogroups_2024-Update
Bradi3g60762	No alias	Transducin/WD40 repeat-like superfamily protein	0.03	Orthogroups_2024-Update
Brara.C02279.1	No alias	component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.05	Orthogroups_2024-Update
Cre10.g417950	No alias	Transducin/WD40 repeat-like superfamily protein	0.03	Orthogroups_2024-Update
Glyma.12G167800	No alias	Transducin/WD40 repeat-like superfamily protein	0.02	Orthogroups_2024-Update
Kfl00363_0120	kfl00363_0120_v1.1	(at2g40360 : 713.0) Transducin/WD40 repeat-like...	0.05	Orthogroups_2024-Update
Seita.6G140100.1	No alias	component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.05	Orthogroups_2024-Update
Sobic.003G156500.1	No alias	component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.05	Orthogroups_2024-Update
Sopen01g046140	No alias	BOP1NT (NUC169) domain	0.04	Orthogroups_2024-Update
evm.model.contig_4408.23	No alias	(at2g40360 : 214.0) Transducin/WD40 repeat-like...	0.01	Orthogroups_2024-Update
evm.model.tig00000382.38	No alias	(at2g40360 : 570.0) Transducin/WD40 repeat-like...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	16Dec
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	16Dec
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
CC	GO:0000145	exocyst	IEP	Predicted GO
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
CC	GO:0005732	small nucleolar ribonucleoprotein complex	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0016192	vesicle-mediated transport	IEP	Predicted GO
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
CC	GO:0017119	Golgi transport complex	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
CC	GO:0034457	Mpp10 complex	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044431	Golgi apparatus part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044448	cell cortex part	IEP	Predicted GO
CC	GO:0044452	nucleolar part	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
CC	GO:0099023	tethering complex	IEP	Predicted GO
MF	GO:0106073	dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	692	727
IPR001680	WD40_repeat	743	778
IPR001680	WD40_repeat	445	480
IPR012953	BOP1_N_dom	186	442

External Links

No external refs found!

Mp2g26050.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation