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  5. Mp3g02370.1

Mp3g02370.1


Description : histone (H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g02370.1
Cluster HCAA Clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
At5g27670 No alias Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178UFF2] 0.02 Orthogroups_2024-Update
Brara.A02813.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Brara.B01060.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
Brara.B03550.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Brara.F02852.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Brara.H02855.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Brara.J01356.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Glyma.03G241800 No alias gamma histone variant H2AX 0.03 Orthogroups_2024-Update
Glyma.13G334300 No alias histone H2A 12 0.02 Orthogroups_2024-Update
Glyma.15G040300 No alias histone H2A 12 0.02 Orthogroups_2024-Update
HORVU1Hr1G071960.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU5Hr1G108640.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU5Hr1G110680.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
PSME_00021426-RA No alias (p40280|h2a_maize : 125.0) Histone H2A - Zea mays... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA 16Dec
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 9 85
IPR032454 Histone_H2A_C 88 120
No external refs found!