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At5g08310


Description : Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P0C8Q6]


Gene families : OG_42_0009566 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009566_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g08310
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
PSME_00056289-RA No alias (at5g08310 : 581.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 153 188
IPR002885 Pentatricopeptide_repeat 252 279
IPR002885 Pentatricopeptide_repeat 217 244
IPR002885 Pentatricopeptide_repeat 756 784
IPR002885 Pentatricopeptide_repeat 442 470
IPR002885 Pentatricopeptide_repeat 682 731
IPR002885 Pentatricopeptide_repeat 612 661
IPR002885 Pentatricopeptide_repeat 475 515
IPR002885 Pentatricopeptide_repeat 284 329
No external refs found!