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  5. Mp3g05650.1

Mp3g05650.1


Description : poly(A) RNA polymerase (TRF4)


Gene families : OG_42_0004923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004923_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g05650.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre17.g720750 No alias Nucleotidyltransferase family protein 0.01 Orthogroups_2024-Update
Sopen10g002900 No alias Nucleotidyltransferase domain 0.02 Orthogroups_2024-Update
evm.model.tig00000663.13 No alias (at5g53770 : 204.0) Nucleotidyltransferase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 229 305
IPR002058 PAP_assoc 399 457
No external refs found!