Description : histone (H3)
Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Marchantia polymorpha: Mp3g07730.1 | |
Cluster | HCAA Clusters: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
438193 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_56508 | No alias | histone h3.2 | 0.02 | Orthogroups_2024-Update | |
At1g09200 | No alias | Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] | 0.02 | Orthogroups_2024-Update | |
At3g27360 | No alias | Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] | 0.03 | Orthogroups_2024-Update | |
At5g10390 | No alias | Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] | 0.02 | Orthogroups_2024-Update | |
At5g10400 | No alias | Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] | 0.03 | Orthogroups_2024-Update | |
Brara.B00354.1 | No alias | histone *(H3) | 0.04 | Orthogroups_2024-Update | |
Brara.B03430.1 | No alias | histone *(H3) | 0.04 | Orthogroups_2024-Update | |
Brara.D00649.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Brara.I01745.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Brara.J02314.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Brara.J02315.1 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
Cre06.g264650 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g265250 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre06.g274850 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre06.g276600 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre06.g276850 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre16.g661450 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.05G188700 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G227400 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.11G130900 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G342000 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.15G032300 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G222200 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G100380.1 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G100690.1 | No alias | histone *(H3) | 0.01 | Orthogroups_2024-Update | |
MA_131523g0020 | No alias | (at5g65360 : 228.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
Pp1s275_13V6 | No alias | histone h3 | 0.02 | Orthogroups_2024-Update | |
Seita.7G095500.1 | No alias | histone *(H3) | 0.01 | Orthogroups_2024-Update | |
Solyc01g074000 | No alias | Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) | 0.02 | Orthogroups_2024-Update | |
Solyc01g079110 | No alias | Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) | 0.02 | Orthogroups_2024-Update | |
Solyc01g080600 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.02 | Orthogroups_2024-Update | |
Solyc02g077480 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.06 | Orthogroups_2024-Update | |
Solyc04g074580 | No alias | Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) | 0.04 | Orthogroups_2024-Update | |
Solyc10g008910 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.07 | Orthogroups_2024-Update | |
Solyc12g056540 | No alias | Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) | 0.06 | Orthogroups_2024-Update | |
Sopen01g030620 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen01g030790 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen01g032420 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen01g033540 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen01g033560 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen01g033830 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen02g022390 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen10g004700 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen12g029140 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | 16Dec |
MF | GO:0003677 | DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predicted GO |
CC | GO:0000145 | exocyst | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006887 | exocytosis | IEP | Predicted GO |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
BP | GO:0007264 | small GTPase mediated signal transduction | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0022406 | membrane docking | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
BP | GO:0022904 | respiratory electron transport chain | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030118 | clathrin coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030125 | clathrin vesicle coat | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Predicted GO |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
BP | GO:0046903 | secretion | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
BP | GO:0051640 | organelle localization | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
MF | GO:0106073 | dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity | IEP | Predicted GO |
BP | GO:0140029 | exocytic process | IEP | Predicted GO |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predicted GO |
MF | GO:1901567 | fatty acid derivative binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
No external refs found! |