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  5. Mp3g07780.1

Mp3g07780.1


Description : no hits & (original description: none)


Gene families : OG_42_0001296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g07780.1
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
At2g25970 No alias F17H15.1/F17H15.1 [Source:UniProtKB/TrEMBL;Acc:O82762] 0.02 Orthogroups_2024-Update
Bradi4g10715 No alias EIN3-binding F box protein 1 0.02 Orthogroups_2024-Update
MA_10434164g0020 No alias (at2g25970 : 309.0) KH domain-containing protein;... 0.02 Orthogroups_2024-Update
MA_13061g0010 No alias (at2g25970 : 288.0) KH domain-containing protein;... 0.02 Orthogroups_2024-Update
PSME_00003708-RA No alias (at2g25970 : 332.0) KH domain-containing protein;... 0.03 Orthogroups_2024-Update
Pp1s87_162V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Solyc12g095960 No alias Far upstream element-binding protein 2 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 146 211
IPR004088 KH_dom_type_1 241 312
No external refs found!