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  5. At5g09510

At5g09510


Description : 40S ribosomal protein S15-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY64]


Gene families : OG_42_0001901 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g09510
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
172403 No alias Ribosomal protein S19 family protein 0.05 Orthogroups_2024-Update
Bradi1g05340 No alias Ribosomal protein S19 family protein 0.06 Orthogroups_2024-Update
Bradi1g55280 No alias Ribosomal protein S19 family protein 0.05 Orthogroups_2024-Update
Brara.H03058.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.I05501.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.J00241.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Cre08.g360900 No alias Ribosomal protein S19 family protein 0.06 Orthogroups_2024-Update
Glyma.07G269600 No alias Ribosomal protein S19 family protein 0.03 Orthogroups_2024-Update
Glyma.17G004300 No alias Ribosomal protein S19 family protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G057430.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
LOC_Os03g58430 No alias 40S ribosomal protein S15, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os07g08660 No alias 40S ribosomal protein S15, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g15000.1 No alias component RPS15 of SSU proteome 0.02 Orthogroups_2024-Update
PSME_00033145-RA No alias (p31674|rs15_orysa : 265.0) 40S ribosomal protein S15 -... 0.04 Orthogroups_2024-Update
Pp1s13_413V6 No alias 40s ribosomal protein s15 0.05 Orthogroups_2024-Update
Pp1s223_96V6 No alias 40s ribosomal protein s15 0.02 Orthogroups_2024-Update
Pp1s47_42V6 No alias 40s ribosomal protein s15 0.05 Orthogroups_2024-Update
Pp1s91_124V6 No alias 40s ribosomal protein s15 0.06 Orthogroups_2024-Update
Seita.2G059900.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Seita.9G053600.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.001G054900.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.002G056200.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Solyc02g082000 No alias Ribosomal protein S19 family protein (AHRD V3.3 *** AT5G09500.1) 0.06 Orthogroups_2024-Update
Solyc06g053820 No alias Chloroplast omega-3 fatty acid desaturase (AHRD V3.3 --*... 0.05 Orthogroups_2024-Update
Solyc09g083370 No alias Ribosomal protein S19 family protein (AHRD V3.3 *** AT5G09510.1) 0.06 Orthogroups_2024-Update
Sopen02g026630 No alias Ribosomal protein S19 0.1 Orthogroups_2024-Update
Sopen06g018940 No alias Ribosomal protein S19 0.08 Orthogroups_2024-Update
evm.model.contig_651.1 No alias (at5g09500 : 219.0) Ribosomal protein S19 family... 0.07 Orthogroups_2024-Update
evm.model.tig00020830.61 No alias (p31674|rs15_orysa : 236.0) 40S ribosomal protein S15 -... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 50 135
No external refs found!