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  5. Mp3g11710.1

Mp3g11710.1


Description : scaffold component VCS of mRNA decapping complex


Gene families : OG_42_0001770 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g11710.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At3g13290 No alias Varicose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9] 0.03 Orthogroups_2024-Update
Bradi1g43097 No alias varicose-related 0.02 Orthogroups_2024-Update
Cre12.g553100 No alias varicose-related 0.01 Orthogroups_2024-Update
Glyma.08G337200 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G016800 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G122400 No alias varicose-related 0.02 Orthogroups_2024-Update
Glyma.18G072400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G045240.4 No alias scaffold component *(VCS) of mRNA decapping complex 0.02 Orthogroups_2024-Update
MA_10431534g0030 No alias (at3g13300 : 338.0) Encodes VCS (VARICOSE). Involved... 0.04 Orthogroups_2024-Update
PSME_00010984-RA No alias (at3g13300 : 912.0) Encodes VCS (VARICOSE). Involved... 0.02 Orthogroups_2024-Update
Pp1s132_74V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s199_83V6 No alias MDC11.13; transducin family protein / WD-40 repeat... 0.02 Orthogroups_2024-Update
Seita.1G300800.1 No alias scaffold component *(VCS) of mRNA decapping complex 0.02 Orthogroups_2024-Update
Sobic.004G256500.1 No alias scaffold component *(VCS) of mRNA decapping complex 0.02 Orthogroups_2024-Update
Sopen07g034150 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 475 510
No external refs found!