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  5. Mp3g13110.1

Mp3g13110.1


Description : CDK5RAP1-like protein OS=Oryza sativa subsp. japonica (sp|q2r1u4|ck5p1_orysj : 693.0)


Gene families : OG_42_0006567 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006567_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g13110.1
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14840 No alias Methylthiotransferase 0.02 Orthogroups_2024-Update
HORVU4Hr1G029570.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g38030 No alias CDK5RAP1, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s25_71V6 No alias cdk5 regulatory subunit associated protein 1 0.03 Orthogroups_2024-Update
Seita.8G170600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G169900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen02g029420 No alias Radical SAM superfamily 0.02 Orthogroups_2024-Update
evm.model.tig00020552.3 No alias (at4g36390 : 216.0) Methylthiotransferase; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
MF GO:0035596 methylthiotransferase activity IEA 16Dec
MF GO:0051536 iron-sulfur cluster binding IEA 16Dec
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013848 Methylthiotransferase_N 165 277
IPR007197 rSAM 325 536
IPR002792 TRAM_dom 592 627
No external refs found!