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  5. Mp3g17320.1

Mp3g17320.1


Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 OS=Arabidopsis thaliana (sp|q93y16|deah4_arath : 747.0)


Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g17320.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G385931 No alias RNA helicase family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0004386 helicase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR011709 DUF1605 561 643
IPR001650 Helicase_C 210 337
IPR007502 Helicase-assoc_dom 402 490
IPR011545 DEAD/DEAH_box_helicase_dom 13 167
No external refs found!