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  5. Mp3g22970.1

Mp3g22970.1


Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana (sp|q9fjr0|rent1_arath : 214.0)


Gene families : OG_42_0002551 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002551_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g22970.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
90782 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Orthogroups_2024-Update
A4A49_12357 No alias regulator of nonsense transcripts 1-like protein 0.05 Orthogroups_2024-Update
At5g35970 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
Bradi3g52690 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Bradi4g08630 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Brara.D00796.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G146486 No alias DNA-binding protein, putative 0.02 Orthogroups_2024-Update
Glyma.02G001000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.10G000200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
HORVU0Hr1G012190.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G016860.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00323_0120 kfl00323_0120_v1.1 (at5g35970 : 675.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
Kfl00400_0090 kfl00400_0090_v1.1 (at2g03270 : 791.0) DNA-binding protein, putative;... 0.02 Orthogroups_2024-Update
LOC_Os09g04440 No alias DNA-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.013G073900 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Pp1s229_36V6 No alias immunoglobulin mu binding protein 2 0.03 Orthogroups_2024-Update
Seita.1G288500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G161400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g097370 No alias DNA-binding SMUBP-2 (AHRD V3.3 *** A0A0B0N417_GOSAR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!