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Description : RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061FV20_THECC)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc03g114190 | |
| Cluster | HCCA clusters: Cluster_222 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 412606 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_33505 | No alias | ring-h2 finger protein atl72 | 0.05 | Orthogroups_2024-Update | |
| At5g41450 | No alias | RING/U-box superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| Brara.E00161.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I02379.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G021796 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G017300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G028370.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G011010.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| PSME_00054098-RA | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.04 | Orthogroups_2024-Update | |
| Potri.008G219200 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
| Potri.012G003900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s100_96V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Pp1s20_280V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Pp1s71_162V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Seita.1G203900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc11g005290 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g048070 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen02g017550 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006952 | defense response | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0052736 | beta-glucanase activity | IEP | Predicted GO |
| MF | GO:0052861 | glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 75 | 118 |
| No external refs found! |