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  5. Mp4g01500.1

Mp4g01500.1


Description : component ARPF2 of ARPF2-ARRS1 complex


Gene families : OG_42_0004817 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g01500.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At3g23620 No alias Ribosome production factor 2 homolog... 0.04 Orthogroups_2024-Update
Bradi2g57720 No alias Ribosomal RNA processing Brix domain protein 0.03 Orthogroups_2024-Update
Bradi4g31410 No alias Ribosomal RNA processing Brix domain protein 0.04 Orthogroups_2024-Update
Brara.A02631.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.02 Orthogroups_2024-Update
Brara.G00716.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.03 Orthogroups_2024-Update
Cre03.g197000 No alias Ribosomal RNA processing Brix domain protein 0.07 Orthogroups_2024-Update
GRMZM2G069518 No alias Ribosomal RNA processing Brix domain protein 0.02 Orthogroups_2024-Update
Glyma.13G151300 No alias Ribosomal RNA processing Brix domain protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G061870.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.04 Orthogroups_2024-Update
Kfl00047_0160 kfl00047_0160_v1.1 (at3g23620 : 269.0) Ribosomal RNA processing Brix domain... 0.03 Orthogroups_2024-Update
LOC_Os01g33030 No alias Brix domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.015G088700 No alias Ribosomal RNA processing Brix domain protein 0.02 Orthogroups_2024-Update
Pp1s13_19V6 No alias brix domain containing 1 0.03 Orthogroups_2024-Update
Seita.3G186100.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.02 Orthogroups_2024-Update
Sobic.009G190300.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.02 Orthogroups_2024-Update
Solyc10g083600 No alias Brix domain-containing protein (AHRD V3.3 *** H9A0F8_NICBE) 0.03 Orthogroups_2024-Update
Sopen10g033080 No alias Brix domain 0.02 Orthogroups_2024-Update
evm.model.contig_462.6 No alias (at3g23620 : 201.0) Ribosomal RNA processing Brix domain... 0.04 Orthogroups_2024-Update
evm.model.tig00001003.36 No alias (at3g23620 : 175.0) Ribosomal RNA processing Brix domain... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0098519 nucleotide phosphatase activity, acting on free nucleotides IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007109 Brix 35 233
No external refs found!