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  5. Mp4g02920.1

Mp4g02920.1


Description : component RPL22 of LSU proteome component


Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g02920.1
Cluster HCAA Clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
A4A49_12264 No alias 60s ribosomal protein l22-2 0.03 Orthogroups_2024-Update
At3g05560 No alias 60S ribosomal protein L22-2... 0.04 Orthogroups_2024-Update
Bradi1g62830 No alias Ribosomal L22e protein family 0.02 Orthogroups_2024-Update
Brara.B03556.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.E03358.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.F02844.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Cre07.g357850 No alias Ribosomal L22e protein family 0.06 Orthogroups_2024-Update
GRMZM2G134107 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Glyma.03G235000 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
Glyma.20G237000 No alias Ribosomal L22e protein family 0.06 Orthogroups_2024-Update
HORVU2Hr1G019160.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU7Hr1G080630.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00104_0130 kfl00104_0130_v1.1 (at5g27770 : 144.0) Ribosomal L22e protein family;... 0.06 Orthogroups_2024-Update
PSME_00024504-RA No alias (at3g05560 : 145.0) Ribosomal L22e protein family;... 0.02 Orthogroups_2024-Update
Potri.010G012700 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Pp1s283_20V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s457_15V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s81_57V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.2G429500.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.001G376600.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Solyc01g099830 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) 0.04 Orthogroups_2024-Update
Solyc09g075150 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.02 Orthogroups_2024-Update
Solyc09g075160 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.03 Orthogroups_2024-Update
Sopen01g043340 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Sopen09g029970 No alias Ribosomal L22e protein family 0.02 Orthogroups_2024-Update
Sopen09g029980 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
evm.model.contig_2121.19 No alias (at3g05560 : 87.0) Ribosomal L22e protein family;... 0.05 Orthogroups_2024-Update
evm.model.tig00001206.7 No alias (at3g05560 : 112.0) Ribosomal L22e protein family;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 18 127
No external refs found!