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  5. Mp4g06330.1

Mp4g06330.1


Description : Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana (sp|q8gyp6|ppr49_arath : 589.0)


Gene families : OG_42_0004371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g06330.1
Cluster HCAA Clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Pp1s87_47V6 No alias pentatricopeptide repeat-containing 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 697 749
IPR002885 Pentatricopeptide_repeat 597 643
IPR002885 Pentatricopeptide_repeat 492 537
IPR002885 Pentatricopeptide_repeat 461 490
IPR002885 Pentatricopeptide_repeat 565 595
No external refs found!