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Description : serine hydroxymethyltransferase. serine hydroxymethyltransferase
Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha: Mp4g11800.1 | |
| Cluster | HCAA Clusters: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_31930 | No alias | serine hydroxymethyltransferase 7 | 0.02 | Orthogroups_2024-Update | |
| A4A49_33285 | No alias | serine hydroxymethyltransferase, mitochondrial | 0.02 | Orthogroups_2024-Update | |
| At1g36370 | No alias | Serine hydroxymethyltransferase 7... | 0.04 | Orthogroups_2024-Update | |
| At4g37930 | No alias | Serine hydroxymethyltransferase 1, mitochondrial... | 0.02 | Orthogroups_2024-Update | |
| Bradi4g08097 | No alias | serine hydroxymethyltransferase 4 | 0.01 | Orthogroups_2024-Update | |
| Bradi4g19470 | No alias | serine hydroxymethyltransferase 4 | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G202000 | No alias | serine transhydroxymethyltransferase 1 | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G184500 | No alias | serine hydroxymethyltransferase 2 | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G082070.3 | No alias | serine hydroxymethyltransferase *(SHM) & serine... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g22030 | No alias | serine hydroxymethyltransferase, mitochondrial... | 0.02 | Orthogroups_2024-Update | |
| MA_11357g0010 | No alias | (at4g13930 : 800.0) Encodes a serine... | 0.02 | Orthogroups_2024-Update | |
| Pp1s291_35V6 | No alias | serine hydroxymethyltransferase | 0.02 | Orthogroups_2024-Update | |
| Pp1s79_54V6 | No alias | glycine hydroxymethyltransferase | 0.03 | Orthogroups_2024-Update | |
| Seita.8G115500.1 | No alias | serine hydroxymethyltransferase *(SHM) & EC_2.1... | 0.02 | Orthogroups_2024-Update | |
| Seita.9G099700.1 | No alias | serine hydroxymethyltransferase *(SHM) & serine... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g046400 | No alias | Serine hydroxymethyltransferase | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006508 | proteolysis | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| BP | GO:0007155 | cell adhesion | IEP | Predicted GO |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
| MF | GO:0008430 | selenium binding | IEP | Predicted GO |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0022610 | biological adhesion | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR039429 | SHMT-like_dom | 248 | 654 |
| No external refs found! |