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  5. Mp4g12490.1

Mp4g12490.1


Description : transcription factor (MADS/AGL)


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g12490.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
At1g24260 No alias At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9] 0.02 Orthogroups_2024-Update
At1g65360 No alias Agamous-like MADS-box protein AGL23... 0.03 Orthogroups_2024-Update
At2g24840 No alias Agamous-like MADS-box protein AGL61... 0.03 Orthogroups_2024-Update
At5g62165 No alias MADS-box protein AGL42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIS1] 0.02 Orthogroups_2024-Update
Bradi2g43290 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Bradi3g41260 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.D01347.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E02241.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I02295.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01588.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G171650 No alias AGAMOUS-like 79 0.02 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.02 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Glyma.13G223300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.14G183800 No alias AGAMOUS-like 16 0.02 Orthogroups_2024-Update
HORVU1Hr1G047560.2 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
HORVU1Hr1G063620.2 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.02 Orthogroups_2024-Update
LOC_Os03g54170 No alias OsMADS34 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49150 No alias OsMADS17 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g11414 No alias OsMADS58 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
MA_211156g0010 No alias (q40885|ag_pethy : 164.0) Floral homeotic protein... 0.01 Orthogroups_2024-Update
Potri.003G170200 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Potri.004G115500 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.005G182200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.007G073000 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.008G041500 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Pp1s171_71V6 No alias b-class mads-box transcription factor 0.02 Orthogroups_2024-Update
Seita.5G143100.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.7G125400.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g105800 No alias MADS box transcription factor (AHRD V1 **--... 0.02 Orthogroups_2024-Update
Solyc03g006830 No alias MADS-box transcription factor FYFL (AHRD V3.3 *** W5S185_SOLLC) 0.02 Orthogroups_2024-Update
Sopen01g048260 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update
Sopen02g015950 No alias K-box region 0.02 Orthogroups_2024-Update
Sopen03g002820 No alias SRF-type transcription factor (DNA-binding and... 0.03 Orthogroups_2024-Update
evm.model.contig_454.6 No alias (at3g57230 : 92.4) MADS-box transcription factor.... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!