1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp4g15790.1

Mp4g15790.1


Description : component RPL13a of LSU proteome component


Gene families : OG_42_0002020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002020_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g15790.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
A4A49_55645 No alias 60s ribosomal protein l13a-4 0.03 Orthogroups_2024-Update
At3g07110 No alias Ribosomal protein L13 family protein... 0.02 Orthogroups_2024-Update
Bradi1g08260 No alias Ribosomal protein L13 family protein 0.1 Orthogroups_2024-Update
Bradi1g59280 No alias Ribosomal protein L13 family protein 0.05 Orthogroups_2024-Update
Brara.B03455.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.C03976.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.F02982.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.G00660.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.I00372.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.I01172.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Cre12.g532550 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
Glyma.08G353900 No alias Ribosomal protein L13 family protein 0.03 Orthogroups_2024-Update
Glyma.08G354000 No alias Ribosomal protein L13 family protein 0.03 Orthogroups_2024-Update
Glyma.09G024000 No alias Ribosomal protein L13 family protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G096060.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Kfl00360_0020 kfl00360_0020_v1.1 (at3g07110 : 303.0) Ribosomal protein L13 family... 0.03 Orthogroups_2024-Update
PSME_00002229-RA No alias (at3g24830 : 323.0) Ribosomal protein L13 family... 0.03 Orthogroups_2024-Update
Potri.002G242600 No alias Ribosomal protein L13 family protein 0.05 Orthogroups_2024-Update
Pp1s165_40V6 No alias 60s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s174_48V6 No alias 60s ribosomal protein 0.09 Orthogroups_2024-Update
Pp1s63_162V6 No alias 60s ribosomal protein 0.08 Orthogroups_2024-Update
Pp1s75_223V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s80_110V6 No alias 60s ribosomal protein 0.08 Orthogroups_2024-Update
Seita.9G087700.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G085400.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.009G022400.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Solyc05g053670 No alias 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g091740 No alias 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g098330 No alias 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Sopen05g032170 No alias Ribosomal protein L13 0.09 Orthogroups_2024-Update
Sopen09g034630 No alias Ribosomal protein L13 0.06 Orthogroups_2024-Update
Sopen12g033110 No alias Ribosomal protein L13 0.06 Orthogroups_2024-Update
evm.model.contig_3478.11 No alias (at3g24830 : 235.0) Ribosomal protein L13 family... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902562 H4 histone acetyltransferase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 12 120
No external refs found!