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  5. Mp4g17020.1

Mp4g17020.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g17020.1
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g42760 No alias zinc finger protein-related, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 253 295
IPR002867 IBR_dom 166 229
No external refs found!