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  5. At5g12850

At5g12850


Description : Zinc finger CCCH domain-containing protein 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV4]


Gene families : OG_42_0002653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g12850
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
A4A49_22552 No alias zinc finger ccch domain-containing protein 30 0.03 Orthogroups_2024-Update
Glyma.10G100400 No alias CCCH-type zinc finger protein with ARM repeat domain 0.03 Orthogroups_2024-Update
Kfl00028_0220 kfl00028_0220_v1.1 (at2g41900 : 319.0) CCCH-type zinc finger protein with... 0.03 Orthogroups_2024-Update
PSME_00052684-RA No alias (at2g41900 : 523.0) CCCH-type zinc finger protein with... 0.03 Orthogroups_2024-Update
Solyc01g087170 No alias Zinc finger transcription factor 11 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 83 152
No external refs found!