At5g13000

Description : Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]

Gene families : OG_42_0000121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g13000
Cluster	HCCA clusters: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23107	No alias	callose synthase 11	0.04	Orthogroups_2024-Update
Bradi1g76617	No alias	glucan synthase-like 12	0.05	Orthogroups_2024-Update
Bradi1g77247	No alias	glucan synthase-like 10	0.02	Orthogroups_2024-Update
Bradi2g46250	No alias	glucan synthase-like 5	0.02	Orthogroups_2024-Update
Bradi3g60790	No alias	glucan synthase-like 12	0.02	Orthogroups_2024-Update
Brara.E03232.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
Brara.G01829.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.05	Orthogroups_2024-Update
Brara.K01844.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
GRMZM2G326643	No alias	glucan synthase-like 8	0.03	Orthogroups_2024-Update
Glyma.06G173500	No alias	glucan synthase-like 8	0.02	Orthogroups_2024-Update
Glyma.20G244900	No alias	glucan synthase-like 10	0.05	Orthogroups_2024-Update
HORVU3Hr1G042540.6	No alias	EC_2.4 glycosyltransferase & callose synthase	0.04	Orthogroups_2024-Update
HORVU3Hr1G058470.5	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
HORVU6Hr1G095090.27	No alias	EC_2.4 glycosyltransferase & callose synthase	0.02	Orthogroups_2024-Update
LOC_Os02g14900	No alias	1,3-beta-glucan synthase component domain containing...	0.03	Orthogroups_2024-Update
LOC_Os03g03610	No alias	1,3-beta-glucan synthase component domain containing...	0.02	Orthogroups_2024-Update
Mp3g24830.1	No alias	callose synthase	0.02	Orthogroups_2024-Update
PSME_00001231-RA	No alias	(at2g36850 : 1529.0) Encodes GSL8, a member of the...	0.04	Orthogroups_2024-Update
PSME_00001242-RA	No alias	(at3g07160 : 348.0) Encodes GSL10, a member of the...	0.02	Orthogroups_2024-Update
Pp1s13_432V6	No alias	transferring glycosyl	0.02	Orthogroups_2024-Update
Pp1s40_185V6	No alias	No description available	0.04	Orthogroups_2024-Update
Pp1s88_136V6	No alias	transferring glycosyl	0.04	Orthogroups_2024-Update
Seita.1G379400.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
Seita.2G018900.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
Seita.4G288300.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
Seita.5G266100.1	No alias	EC_2.4 glycosyltransferase & callose synthase	0.03	Orthogroups_2024-Update
Solyc07g061920	No alias	glucan synthase-like 4 (AHRD V3.3 *** AT3G14570.1)	0.03	Orthogroups_2024-Update
evm.model.tig00000431.18	No alias	(at1g06490 : 158.0) encodes a gene similar to callose...	0.02	Orthogroups_2024-Update
evm.model.tig00001041.30	No alias	(at4g03550 : 167.0) Encodes a callose synthase that is...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	InterProScan predictions
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044459	plasma membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
MF	GO:0004832	valine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
CC	GO:0044431	Golgi apparatus part	IEP	Predicted GO
CC	GO:0044433	cytoplasmic vesicle part	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003440	Glyco_trans_48	1148	1847
IPR026899	FKS1-like_dom1	322	434
IPR039431	Vta1/CALS_N	45	173

External Links

No external refs found!

At5g13000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation