1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp4g20670.1

Mp4g20670.1


Description : SYP1-group Qa-type SNARE component


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g20670.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
130326 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
Brara.B00269.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
GRMZM2G131525 No alias syntaxin of plants 111 0.02 Orthogroups_2024-Update
Glyma.02G069700 No alias syntaxin of plants 111 0.03 Orthogroups_2024-Update
Glyma.16G151200 No alias syntaxin of plants 111 0.03 Orthogroups_2024-Update
Solyc06g053760 No alias Syntaxin, putative (AHRD V3.3 *** B9SHK3_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003964 RNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0034998 oligosaccharyltransferase I complex IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 40 245
IPR000727 T_SNARE_dom 247 297
No external refs found!