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  5. Mp4g21750.1

Mp4g21750.1


Description : histone (H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g21750.1
Cluster HCAA Clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G058940.2 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU6Hr1G011490.2 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
LOC_Os07g36130 No alias core histone H2A/H2B/H3/H4, putative, expressed 0.01 Orthogroups_2024-Update
MA_865576g0010 No alias (p50567|h2a_chlre : 138.0) Histone H2A - Chlamydomonas... 0.03 Orthogroups_2024-Update
MA_93628g0020 No alias (q2hu68|h2a1_medtr : 174.0) Probable histone H2A.1 -... 0.03 Orthogroups_2024-Update
PSME_00008210-RA No alias (at1g54690 : 107.0) Encodes HTA3, a histone H2A protein.... 0.03 Orthogroups_2024-Update
Sobic.002G276000.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sobic.009G015900.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sopen01g042970 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen09g029130 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA 16Dec
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 94 128
IPR007125 Histone_H2A/H2B/H3 13 91
No external refs found!