At5g13330

Description : Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g13330
Cluster	HCCA clusters: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
92334	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
A4A49_11348	No alias	ethylene-responsive transcription factor erf010	0.03	Orthogroups_2024-Update
A4A49_15089	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_20472	No alias	ethylene-responsive transcription factor 13	0.03	Orthogroups_2024-Update
At4g17500	No alias	Ethylene-responsive transcription factor 1A...	0.04	Orthogroups_2024-Update
At5g25390	No alias	SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7]	0.03	Orthogroups_2024-Update
At5g43410	No alias	Ethylene-responsive transcription factor ERF096...	0.05	Orthogroups_2024-Update
Brara.C01595.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.C04275.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Glyma.02G261700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.09G242600	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.10G099800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.15G079100	No alias	ethylene responsive element binding factor 2	0.03	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G082310.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G082880.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.07	Orthogroups_2024-Update
LOC_Os02g13710	No alias	ethylene-responsive transcription factor TINY, putative,...	0.02	Orthogroups_2024-Update
LOC_Os02g45450	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g46440	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os06g09717	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g26420	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g39330	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
PSME_00008357-RA	No alias	(at5g21960 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00036243-RA	No alias	(at5g11590 : 104.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G110500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.013G135600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Seita.1G174700.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.8G173100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G350500.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Sobic.006G080200.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G188701.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G052600.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Solyc01g090560	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Solyc04g072900	No alias	dehydration-responsive element binding protein 3	0.04	Orthogroups_2024-Update
Sopen01g050460	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g004160	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	38	87

External Links

No external refs found!

At5g13330

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation