Mp4g24070.1

Description : component RPL9 of LSU proteome component

Gene families : OG_42_0002219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002219_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha: Mp4g24070.1
Cluster	HCAA Clusters: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
269009	No alias	Ribosomal protein L6 family	0.04	Orthogroups_2024-Update
Bradi1g21850	No alias	Ribosomal protein L6 family	0.04	Orthogroups_2024-Update
Bradi1g52040	No alias	Ribosomal protein L6 family	0.05	Orthogroups_2024-Update
Brara.B02434.1	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.B02733.1	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.I02353.1	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.I02694.1	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre12.g494050	No alias	Ribosomal protein L6 family	0.03	Orthogroups_2024-Update
Glyma.04G226900	No alias	Ribosomal protein L6 family	0.03	Orthogroups_2024-Update
HORVU0Hr1G006020.2	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
HORVU3Hr1G001140.5	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
HORVU7Hr1G002060.1	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Potri.011G148700	No alias	Ribosomal protein L6 family	0.03	Orthogroups_2024-Update
Pp1s327_43V6	No alias	60s ribosomal protein l9	0.06	Orthogroups_2024-Update
Pp1s58_149V6	No alias	60s ribosomal protein l9	0.05	Orthogroups_2024-Update
Pp1s79_157V6	No alias	60s ribosomal protein l9	0.05	Orthogroups_2024-Update
Sobic.010G005300.1	No alias	component *(uL6) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Solyc08g014550	No alias	60S ribosomal L9 (AHRD V3.3 *** A0A0B0N9P7_GOSAR)	0.07	Orthogroups_2024-Update
Solyc12g096700	No alias	60S ribosomal L9 (AHRD V3.3 *** A0A0B0N9P7_GOSAR)	0.03	Orthogroups_2024-Update
Sopen06g029670	No alias	Ribosomal protein L6	0.05	Orthogroups_2024-Update
Sopen12g032530	No alias	Ribosomal protein L6	0.04	Orthogroups_2024-Update
evm.model.contig_564.5	No alias	(at4g10450 : 215.0) Ribosomal protein L6 family;...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR020040	Ribosomal_L6_a/b-dom	12	88
IPR020040	Ribosomal_L6_a/b-dom	100	179

External Links

No external refs found!

Mp4g24070.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation