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  5. Mp5g02180.1

Mp5g02180.1


Description : Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana (sp|q9scp4|pp279_arath : 241.0)


Gene families : OG_42_0001418 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp5g02180.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G027800.8 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G009700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G013700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g057200 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004107 chorismate synthase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 200
IPR002885 Pentatricopeptide_repeat 292 339
IPR002885 Pentatricopeptide_repeat 120 147
IPR002885 Pentatricopeptide_repeat 210 272
IPR002885 Pentatricopeptide_repeat 388 427
No external refs found!