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  5. At5g13840

At5g13840


Description : Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]


Gene families : OG_42_0002050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g13840
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_33477 No alias protein fizzy-related 3 0.05 Orthogroups_2024-Update
Brara.C00586.1 No alias substrate specificity component *(FZR/CCS52) of APC/C E3... 0.11 Orthogroups_2024-Update
Glyma.11G219600 No alias FIZZY-related 3 0.03 Orthogroups_2024-Update
Glyma.18G037800 No alias FIZZY-related 3 0.16 Orthogroups_2024-Update
MA_10290598g0010 No alias (at5g13840 : 613.0) FIZZY-related 3 (FZR3); FUNCTIONS... 0.03 Orthogroups_2024-Update
Solyc06g043150 No alias cell cycle switch 52B 0.14 Orthogroups_2024-Update
Sopen06g013610 No alias WD domain, G-beta repeat 0.08 Orthogroups_2024-Update
evm.model.contig_503.4 No alias (at5g13840 : 377.0) FIZZY-related 3 (FZR3); FUNCTIONS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 291 326
IPR001680 WD40_repeat 331 371
IPR001680 WD40_repeat 420 456
No external refs found!