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  5. Mp5g04380.1

Mp5g04380.1


Description : component RPS2 of SSU proteome


Gene families : OG_42_0002117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp5g04380.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
67484 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
A4A49_17312 No alias 40s ribosomal protein s2-4 0.05 Orthogroups_2024-Update
At1g58380 No alias At1g59359 [Source:UniProtKB/TrEMBL;Acc:G1JSI6] 0.03 Orthogroups_2024-Update
Brara.A02366.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.C02137.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.E00249.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Cre01.g039250 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
Glyma.02G085300 No alias Ribosomal protein S5 family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G086050.2 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
HORVU5Hr1G109910.2 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Kfl00142_0100 kfl00142_0100_v1.1 (at3g57490 : 392.0) Ribosomal protein S5 family protein;... 0.02 Orthogroups_2024-Update
LOC_Os03g59310 No alias ribosomal protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g10660 No alias ribosomal protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_158470g0010 No alias (at3g57490 : 397.0) Ribosomal protein S5 family protein;... 0.02 Orthogroups_2024-Update
PSME_00031543-RA No alias (at3g57490 : 396.0) Ribosomal protein S5 family protein;... 0.03 Orthogroups_2024-Update
Potri.006G052400 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
Pp1s10_190V6 No alias 40s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s274_5V6 No alias 40s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s400_15V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Seita.2G079700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Seita.9G044700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.001G046100.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.001G046300.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Solyc04g063290 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.07 Orthogroups_2024-Update
Solyc04g074300 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.06 Orthogroups_2024-Update
Sopen04g026210 No alias Ribosomal protein S5, N-terminal domain 0.05 Orthogroups_2024-Update
Sopen04g029430 No alias Ribosomal protein S5, N-terminal domain 0.06 Orthogroups_2024-Update
evm.model.contig_4442.1 No alias (at1g58684 : 326.0) Ribosomal protein S5 family protein;... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 174 245
IPR013810 Ribosomal_S5_N 91 155
No external refs found!